Application of biotechnology in breeding lentil for resistance to biotic and abiotic stress

Summary Lentil is a self-pollinating diploid (2n = 14 chromosomes) annual cool season legume crop that is produced throughout the world and is highly valued as a high protein food. Several abiotic stresses are important to lentil yields world wide and include drought, heat, salt susceptibility and iron deficiency. The biotic stresses are numerous and include: susceptibility to Ascochyta blight, caused by Ascochyta lentis; Anthracnose, caused by Colletotrichum truncatum; Fusarium wilt, caused by Fusarium oxysporum; Sclerotinia white mold, caused by Sclerotinia sclerotiorum; rust, caused by Uromyces fabae; and numerous aphid transmitted viruses. Lentil is also highly susceptible to several species of Orabanche prevalent in the Mediterranean region, for which there does not appear to be much resistance in the germplasm. Plant breeders and geneticists have addressed these stresses by identifying resistant/tolerant germplasm, determining the genetics involved and the genetic map positions of the resistant genes. To this end progress has been made in mapping the lentil genome and several genetic maps are available that eventually will lead to the development of a consensus map for lentil. Marker density has been limited in the published genetic maps and there is a distinct lack of co-dominant markers that would facilitate comparisons of the available genetic maps and efficient identification of markers closely linked to genes of interest. Molecular breeding of lentil for disease resistance genes using marker assisted selection, particularly for resistance to Ascochyta blight and Anthracnose, is underway in Australia and Canada and promising results have been obtained. Comparative genomics and synteny analyses with closely related legumes promises to further advance the knowledge of the lentil genome and provide lentil breeders with additional genes and selectable markers for use in marker assisted selection. Genomic tools such as macro and micro arrays, reverse genetics and genetic transformation are emerging technologies that may eventually be available for use in lentil crop improvement.     

Effects of nonindigenous tadpoles on native tadpoles in Florida: evidence of competition

The impacts of nonindigenous species on native ecosystems can be severe, sometimes leading to the extinction of native taxa. Interspecific competition is a potential mechanism of negative impact of invasive species, but few studies have conclusively demonstrated competition between native and nonindigenous taxa. In this study I used experimental manipulations to examine the competitive effects of the larvae of two widely introduced anurans, the cane toad, Bufo marinus, and the Cuban treefrog, Osteopilus septentrionalis, on the growth and development of the larvae of two native anurans (the southern toad, Bufo terrestris, and the green treefrog, Hyla cinerea). The presence of O. septentrionalis larvae consistently impacted growth and development of native larvae, resulting in reduced growth rates and delayed metamorphosis of both native species and smaller mass at metamorphosis of B. terrestris. Hyla cinerea larvae transformed at greater body masses when reared with the rapidly transforming nonindigenous species as a result of competitive release. The negative effects of O. septentrionalis on native larvae were generally significant whether native tadpoles were exposed to O. septentrionalis alone or in combination with B. marinus. In contrast, B. marinus tadpoles did not significantly impact the growth or development of either native species. Neither nonindigenous species significantly decreased the survivorship of native larvae, although a trend toward decreased survivorship was evident for H. cinerea. These results suggest that nonindigenous larval anurans may adversely impact native tadpole communities as a result of interspecific competition.     

Modeling trophic pathways, nutrient cycling, and dynamic stability in soils

Soil communities are compartmentalized into pathways of trophic interactions and nutrient flows that originate from plant roots, bacteria and fungi. The pathways differ in terms of the organisms that comprise them, the habitats that the organisms occupy and the rates by which the organisms process and transfer material and energy. The fungi, nematodes and arthropods within the fungal pathway live in air-filled pore spaces and water films, while the bacteria, protozoa, and nematodes within the bacterial pathway occupy water-filled pore spaces and water films. Organisms within the fungal pathway have longer generation times and process matter at slower rates than those within the bacterial pathway. Empirical studies have shown that under natural conditions the pathways co-exist in a stable manner. The relative sizes (indexed by the densities of organisms) and activities (indexed by nutrient-flow rates, excretion rates and respiration rates) of the pathways may change seasonally and in response to minor disturbances, but they persist. However, large anthropogenic and natural disturbances induce shifts in the relative sizes and activities of the pathways. Coincident with these shifts are reports of changes in the aboveground plant community and the availability and retention of plant limiting nutrients. We developed simple models of the bacterial and fungal pathways to explore the consequences of the observed shifts on the dynamic stability of the system. The more stable configurations occurred when there was a balance in the flow of nutrients between the two pathways. Large shifts in nutrient cycling and community structure towards either the fungal pathway or toward the bacterial pathway resulted in less stable or unstable configurations.     

Identification of phenolic compounds in tissues of the novel olive cultivar hardy's mammoth

A methodological approach to phenolic profiling making extensive use of LC-MS with extracted ion chromatograms was applied to extracts of five different olive tissues: pulp, seed, stone, new-season leaves, and old-season leaves. Tissue extracts of the cultivars Hardy's Mammoth, Corregiola, Verdale, and Manzanillo were analyzed by HPLC with UV and ESI MS detection. Chromatograms of samples of green Hardy's Mammoth drupes, a uniquely Australian olive cultivar, were dominated by a large, broad peak. This peak was not attributable to oleuropein, which is usually the dominant phenolic compound in green olive fruit, but the phenolic compound I. This compound was isolated by semipreparative HPLC and characterized by 1D- and 2D-NMR. Extraction studies showed that the compound was not likely to be an artifact of an enzymatic degradation process. Tritium labeling studies were used to establish a possible relationship between the biosynthesis of I and oleuropein.     

Nitrogen mineralization in a pecan (Carya illinoensis K. Koch)–cotton (Gossypium hirsutum L.) alley cropping system in the southern United States

Information on temporal and spatial patterns of N mineralization is critical in designing tree-crop mixed systems that could maximize N uptake while minimizing N loss. We quantified N mineralization rates in a pecan (Carya illinoensis K. Koch)–cotton (Gossypium hirsutum L.) alley cropping system in northwestern Florida with (non-barrier) and without tree-crop belowground interactions (barrier separating the root systems of pecan and cotton). Monthly rates of mineralization were estimated using buried bag incubations over a 15-month period. In addition, seasonal mineralization rates and cotton lint yield on soils supplied with two sources of N—inorganic fertilizer and organic poultry litter—were assessed. Results indicated that temporal variations in net NH₄ and NO₃ accumulation and mineralization rates were driven primarily by environmental factors and to a lesser degree by initial soil NH₄ and NO₃ levels. Mineralization varied by belowground interaction treatment during the initial growing season, when the non-barrier treatment exhibited a higher mineralization rate than the barrier treatment, likely due to reduced nutrient uptake by cotton in the non-barrier or a higher degree of immobilization in the barrier treatment. Mineralization during the second growing season was similar for both treatments. Source of N had no effects on N transformation in the soil. Lint yield reductions were observed in the non-barrier treatment during both years compared to the barrier treatment, likely due to interspecific competition for water. Yield differences between treatments in the second growing season were likely compounded by a diminishing pre-study fallow effect. Source of N was found to have a significant effect on cotton yield, with inorganic fertilizer resulting in 39% higher lint compared to poultry litter in the barrier treatment.     

Variability in Mapping Acidification Risk Scenarios for Terrestrial Ecosystems in Asian Countries

Acidification has the potential to become a widespread problem in parts of Asia. Just how widespread this risk may be is discussed by comparing sulphur deposition to critical load estimates, taking into account neutralising base cation deposition from soil dust. Two scenarios for the sulphur emission in 2025 are used as inputs to the MATCH atmospheric transfer model to estimate sulphur deposition scenarios. Net acidic deposition using a low and high base cation deposition input is compared to a map of sensitivity of terrestrial ecosystems to acidic deposition. Two ranges of critical loads assigned to this sensitivity map are used. The variability in the maps showing risks of acidification using low and high estimates for critical loads and base cation deposition for two different development pathways is discussed. Certain areas are shown to be at risk in all cases whereas others are very sensitive to the values used to estimate risk.     

Bird communities, roads and development: prospects and constraints of applying empirical models

Our objectives were to explain the prospects and constraints of applying empirical models that relate bird community metrics to broad-scale characteristics of roads and development. We explored the practical value of regression models that were derived for a large protected area in the Chihuahuan Desert. These models related bird species richness, relative abundance, or probability of occurrence to total length of roads within each of two spatial extents (1- and 2-km radii), distance to the nearest road, distance to the nearest development, or the two-way interactions of these variables. Empirical models can be used to inform conservation decisions, to parameterise simulation models for conservation planning, to identify threshold levels of road and development variables, and to determine the focus of management experiments for confirmatory hypothesis testing and improvement of model realism.     

Adsorption—desorption and/or precipitation—dissolution processes of zinc in soils

The concentrations of trace and toxic metals in soil solutions are explained by several authors either in terms of adsorption—desorption or precipitation—dissolution reactions in soils. Data have been given for zinc to test the applicability of both concepts. The results show that the concentrations of zinc in equilibrium solutions with soil clay fractions and whole soil samples at pH values below 7 are determined exclusively by adsorption—desorption reactions for various pH's, contents of bound zinc and compositions of soils. At neutral to alkaline pH values precipitation—dissolution reactions of zinc may take place. There is some evidence that formation of zinc silicates may control the zinc concentration in solution provided natural complexing agents are absent, the affinity of the soil for zinc is low and the content of reaching zinc is high (> ～ 100 ppm). Even at pH values above 7, the formation of other zinc compounds is unlikely in most soils because additions of large amounts of zinc are required to ensure saturation of the adsorption sites of different soil components before the zinc concentration in the soil solution can increase sufficiently to bring about the precipitation of definite compounds. Model experiments in CaCO₃-buffered systems showed that the adsorption capacity for specifically adsorbed zinc (in μmole/g) by the following components increased in the order CaCO₃ (0.44), bentonite (44), humic acid (842), amorphous Fe- and Al-oxides (1190, 1310) and δ -MnO₂ (1540) and demonstrated the importance of Mn-, Fe-, and Al-oxides and humic substances for the binding of zinc in soils containing carbonates, and thus indicate the special role of these components in limiting precipitation reactions.     

Composted biosolids as a source of iron for hybrid poplars (<Emphasis Type="Italic">Populus</Emphasis> sp.) grown in northwest New Mexico

Composted sewage sludge (biosolids) supply plant available Fe and may represent a sustainable alternative to more costly chelated Fe fertilizers currently used to supplement nutrition in hybrid poplar test plots of elevated soil pH. To test the response of poplars, field plots were amended with composted biosolids at two agricultural rates: 22.75 and 44.5 Mg ha⁻¹. Iron EDDHA served as a fertilizer check and control plots received no amendment. The hybrid poplar OP-367 (Populus deltoides × P. nigra) was planted on a 3.6 m grid spacing. Significant amounts of P and Fe originating from the sewage treatment process were detected in soils 13 months after amending. Chlorosis evaluated with a SPAD-502 meter, showed that poplars amended with biosolids remained the least chlorotic and had greater tree growth when compared to Fe EDDHA and control plots during two growing seasons. Biosolids show promise as a cost effective alternative for the remediation of Fe chlorosis in hybrid poplar agroforestry plantations and present new opportunities in northwestern New Mexico for municipalities seeking solid waste land disposal options.     

Effects of leaf age and tree size on stomatal and mesophyll limitations to photosynthesis in mountain beech (Nothofagus solandrii var. cliffortiodes)

Mesophyll conductance, g(m), was estimated from measurements of stomatal conductance to carbon dioxide transfer, g(s), photosynthesis, A, and chlorophyll fluorescence for Year 0 (current-year) and Year 1 (1-year-old) fully sunlit leaves from short (2 m tall, 10-year-old) and tall (15 m tall, 120-year-old) Nothofagus solandrii var. cliffortiodes trees growing in adjacent stands. Rates of photosynthesis at saturating irradiance and ambient CO(2) partial pressure, A(satQ), were 25% lower and maximum rates of carboxylation, V(cmax), were 44% lower in Year 1 leaves compared with Year 0 leaves across both tree sizes. Although g(s) and g(m) were not significantly different between Year 0 and Year 1 leaves and g(s) was not significantly different between tree heights, g(m) was significantly (19%) lower for leaves on tall trees compared with leaves on short trees. Overall, V(cmax) was 60% higher when expressed on the basis of CO(2) partial pressure at the chloroplasts, C(c), compared with V(cmax) on the basis of intercellular CO(2) partial pressure, C(i), but this varied with leaf age and tree size. To interpret the relative stomatal and mesophyll limitations to photosynthesis, we used a model of carbon isotopic composition for whole leaves incorporating g(m) effects to generate a surface of 'operating values' of A over the growing season for all leaf classes. Our analysis showed that A was slightly higher for leaves on short compared with tall trees, but lower g(m) apparently reduced actual A substantially compared with A(satQ). Our findings showed that lower rates of photosynthesis in Year 1 leaves compared with Year 0 leaves were attributable more to increased biochemical limitation to photosynthesis in Year 1 leaves than differences in g(m). However, lower A in leaves on tall trees compared with those on short trees could be attributed in part to lower g(m) and higher stomatal, L(s), and mesophyll, L(m), limitations to photosynthesis, consistent with steeper hydraulic gradients in tall trees.